Protein modeling server

Welcome to Nam Sook Kang's TWN world.

We research computer-aided drug design using topological water netwrok (TWN)

This website provides visiting users calulate hot spot similarity using TWN-RENCOD compared with other traditional methods

Protein binding site similarity calculation methods

Residue-based <- Click for residue-based hot spot similarity calculation

Surface-based <- Click for surface-based hot spot similarity calculation

Interaction-based <- Click for interaction-based hot spot similarity calculation

Topological Water Network (TWN)

Novel protein binding site similarity method

Step by step.
This method needs multiple steps

1. MD simulation <- Click for MD simulation

2. TWN-extraction <- Click for TWN extraction

3. TWN-centroid <- Click for TWN centroid calculation

4. TWN-reordering & similarity calculation <- Click for TWN reordering and similarity calculation

Q & A (error, suggestions, etc.)

Please write inquiry including your e-mail address